ReplicationDomain is an online database resource for storing, sharing and visualizing DNA replication timing and transcription data, as well as other numerical epigenetic data types. Data is typically obtained from DNA microarrays or DNA sequencing. Our site has a user registration system that allows registered users to upload their own data sets. While non-registered users may freely view and download public data sets, registered users may upload their own data sets and view them privately, share them with other registered users, or make published data sets publicly available. In addition we have implemented additional mechanisms that allow users to restrict sharing of data sets to a user designated group of registered users. Further details on the database usage are in the User Guide Page, while data set details are in the Documentation Page.

• Added custom message box after login. These display, among other things, messages from ReplicationDomain regarding your datasets.
• Added filters to top of dataset listing pages to help in selecting datasets.
• Added "Requestable" property for Uber-private datasets.
• Added user input description field for data types.
• Added new print and save functions. Last print size is remembered.
• Improved zoom features. More zoom options and last zoom level is remembered.
• Added password reset request link.
• Added trouble ticket and suggestion link.
• Partial datasets are now separately designated.
• Added gene search function directly from the data display page.
• Added "Select all" and "Hide all" data sets buttons.
• ReplicationDomain now has an educational page on replication timing.
• ReplicationDomain is now a cluster of two servers, registered users get the faster server
• Datasets can now be shared with individual users or user groups, custom groups are supported.
• ReplicationDomain now remembers your previously displayed data sets
• The preferences page for registered users has many new features.
• Total of 5 species now supported, ReplicationDomain will remember your last species.
• 6/10/2009 - Security patches are being installed. 1 minute of downtime at 12pm today.
• 4/09 - Homo Sapien and Drosophilia data support has been completed. Several public Drosophilia datasets are available.
• 3/09 - External user and data upload support are complete. We are now accepting account requests.
• 12/08 - Database structure has been redesigned. Display of data is now < 2 seconds.
• 3/08 - Server and server OS have been upgraded. Display of data is now appreciably faster.

Statistics generated: May 18, 2012 11:40pm

Data Sets: 296
Mus Musculus Data Sets: 135
Homo Sapiens Data Sets: 132
Drosophilia Data Sets: 20
Arabidopsis Data Sets: 5
Schizosaccharomyces Pombe Data Sets: 4
Public Data Sets: 144
Private Data Sets: 152
Gene Expression Data Sets: 43
Replication Timing Data Sets: 210
Data Points: 223259242
Gene Expression Data Points: 7408864
Replication Timing Data Points: 163332249
Most Popular Chromosome: chr1 - 12185 hits